Review



three-dimensional structures of both the wild-type and mutant pigt  (Accelrys)

 
  • Logo
  • About
  • News
  • Press Release
  • Team
  • Advisors
  • Partners
  • Contact
  • Bioz Stars
  • Bioz vStars
  • 90

    Structured Review

    Accelrys three-dimensional structures of both the wild-type and mutant pigt
    Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed <t>using</t> <t>BIOVIA</t> Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in <t>PIGT</t> across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.
    Three Dimensional Structures Of Both The Wild Type And Mutant Pigt, supplied by Accelrys, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/three+dimensional+structures+of+both+the+wild+type+and+mutant+pigt/pmc11943126-186-8-15
    Average 90 stars, based on 1 article reviews
    three-dimensional structures of both the wild-type and mutant pigt - by Bioz Stars, 2026-10
    90/100 stars

    Images

    1) Product Images from "A Novel Homozygous Missense Variant of PIGT Related to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 with Elevated of Serum ALP Level in a Thai Newborn Patient"

    Article Title: A Novel Homozygous Missense Variant of PIGT Related to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 with Elevated of Serum ALP Level in a Thai Newborn Patient

    Journal: International Journal of Molecular Sciences

    doi: 10.3390/ijms26062790

    Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed using BIOVIA Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in PIGT across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.
    Figure Legend Snippet: Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed using BIOVIA Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in PIGT across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.

    Techniques Used: Comparison, Mutagenesis

    Related Articles

    Software:

    Article Title: Inhibitory effects and action mechanism of five antioxidant peptides derived from wheat gluten on cells oxidative stress injury
    Article Snippet: Our previous study identified five peptides Leu-Tyr (LY), Pro-Tyr (PY), Tyr-Gln (YQ), Ala-Pro-Ser-Tyr (APSY), and Arg-Gly-Gly-Tyr (RGGY) from wheat gluten.. However, the mechanism of antioxidant action and structurefunction relationship of these five peptides were still unclear.. In this study, we found that five peptides induced by AAPH in human embryonic kidney cells (HEK-293) suppressed the intracellular reactive oxygen species (ROS) and malondialdehyde (MDA) production.

    Article Title: <i>In Silico</i> Screening of Dual mGluR7/8 Agonists as a Plausible Potential Treatment for ASD: Virtual Screening, Molecular Docking, ADMET Predictions, Molecular Dynamics and MM-PBSA Calculations
    Article Snippet: Autism spectrum disorder is a neurodevelopmental condition that, while highly heterogeneous in individual manifestations, still shares a number of common symptoms such as delayed or no speech, impaired social interaction, cognitive impairments and hypersensitivity to external stimuli.. The theory of glutamatergic neurotransmission positions the metabotropic glutamate receptors (mGluRs) as key neural proteins associated with the development of ASD.. This work presents an extended in silico study aimed at modeling dual agonists for mGluR7/8 receptors with possible efficacy in mitigating symptoms in ASD individuals.

    Article Title: Molecular mechanisms of sulforaphane in Alzheimer’s disease: insights from an in-silico study
    Article Snippet: .. The three-dimensional structures were generated using the RNAComposer software and the BIOVIA Discovery Studio Visualizer program (Nguyen and Kim ). ..

    other:

    Article Title: A Novel Homozygous Missense Variant of PIGT Related to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 with Elevated of Serum ALP Level in a Thai Newborn Patient.
    Article Snippet: The three-dimensional structures of both the wild-type and mutant PIGT (PDB: 7wld) were visualized using BIOVIA software [29].

    Generated:

    Article Title: A novel strategy for ultrasound-assisted immobilized enzyme hydrolysis for the preparation of yak bone collagen peptides: Process optimization, structure and antioxidant mechanisms.
    Article Snippet: .. The three-dimensional structures of the peptides were generated with Discovery Studio 2019 (Dassault Systèmes BIOVIA, USA) and followed by structural optimization using the Prepare Ligands module. ..

    Article Title: A novel strategy for ultrasound-assisted immobilized enzyme hydrolysis for the preparation of yak bone collagen peptides: Process optimization, structure and antioxidant mechanisms
    Article Snippet: .. The three-dimensional structures of the peptides were generated with Discovery Studio 2019 (Dassault Systèmes BIOVIA, USA) and followed by structural optimization using the Prepare Ligands module. ..

    Article Title: Molecular mechanisms of sulforaphane in Alzheimer’s disease: insights from an in-silico study
    Article Snippet: .. The three-dimensional structures were generated using the RNAComposer software and the BIOVIA Discovery Studio Visualizer program (Nguyen and Kim ). ..

    Mutagenesis:

    Article Title: A Novel Homozygous Missense Variant of PIGT Related to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 with Elevated of Serum ALP Level in a Thai Newborn Patient
    Article Snippet: .. The three-dimensional structures of both the wild-type and mutant PIGT (PDB: 7wld) were visualized using BIOVIA software [ ]. ..



    Similar Products

    90
    VANGL2 LTD three-dimensional structure of
    Three Dimensional Structure Of, supplied by VANGL2 LTD, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/three+dimensional+structure+of/pmc11067467__pnas__2310283121__sapp-120-25-25
    Average 90 stars, based on 1 article reviews
    three-dimensional structure of - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    Chembio Diagnostics 3-dimensional (3d) structures of three coumarin derivatives (c30, c30-me, and smsm64)
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    3 Dimensional (3d) Structures Of Three Coumarin Derivatives (C30, C30 Me, And Smsm64), supplied by Chembio Diagnostics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/3+dimensional++3d++structures+of+three+coumarin+derivatives++c30++c30+me++and+smsm64+/pmc12188297-55-5-14
    Average 90 stars, based on 1 article reviews
    3-dimensional (3d) structures of three coumarin derivatives (c30, c30-me, and smsm64) - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    NovoPro Biosciences Inc pdb-formatted file of the three-dimensional (3-d) structure of cordycepin
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Pdb Formatted File Of The Three Dimensional (3 D) Structure Of Cordycepin, supplied by NovoPro Biosciences Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/pdb+formatted+file+of+the+three+dimensional++3+d++structure+of+cordycepin/10__1016_slash_j__lddd__2025__100044-71-9-32
    Average 90 stars, based on 1 article reviews
    pdb-formatted file of the three-dimensional (3-d) structure of cordycepin - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    Thermo Fisher three-dimensional structures
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Three Dimensional Structures, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/pm40419033-243-4-13
    Average 90 stars, based on 1 article reviews
    three-dimensional structures - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    Databank Inc three-dimensional structures
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Three Dimensional Structures, supplied by Databank Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/3d+structures/pm39987520-85-0-8
    Average 90 stars, based on 1 article reviews
    three-dimensional structures - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    Chembridge three-dimensional compound structure library
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Three Dimensional Compound Structure Library, supplied by Chembridge, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/3d+structure+library/pm40333783-2-31-34
    Average 90 stars, based on 1 article reviews
    three-dimensional compound structure library - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    COMSOL Inc three-dimensional structural model of the objective lens assembly
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Three Dimensional Structural Model Of The Objective Lens Assembly, supplied by COMSOL Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/three+dimensional+structural+model+of+the+objective+lens+assembly/10__1016_slash_j__vacuum__2025__114384-147-8-13
    Average 90 stars, based on 1 article reviews
    three-dimensional structural model of the objective lens assembly - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    National Research Council Canada three-dimensional structure analysis
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Three Dimensional Structure Analysis, supplied by National Research Council Canada, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/pm40187454-349-32-15
    Average 90 stars, based on 1 article reviews
    three-dimensional structure analysis - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    MathWorks Inc stl data for the three-dimensional gyroid structures
    Coumarin <t>derivatives</t> can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, <t>C30)</t> selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.
    Stl Data For The Three Dimensional Gyroid Structures, supplied by MathWorks Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/10__1007_slash_s12540___025___01936___5-88-60-65
    Average 90 stars, based on 1 article reviews
    stl data for the three-dimensional gyroid structures - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    90
    Accelrys three-dimensional structures of both the wild-type and mutant pigt
    Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed <t>using</t> <t>BIOVIA</t> Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in <t>PIGT</t> across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.
    Three Dimensional Structures Of Both The Wild Type And Mutant Pigt, supplied by Accelrys, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/three-dimensional+structures/three+dimensional+structures+of+both+the+wild+type+and+mutant+pigt/pmc11943126-186-8-15
    Average 90 stars, based on 1 article reviews
    three-dimensional structures of both the wild-type and mutant pigt - by Bioz Stars, 2026-10
    90/100 stars
      Buy from Supplier

    Image Search Results


    Coumarin derivatives can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, C30) selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.

    Journal: Nucleic Acids Research

    Article Title: Mechanistic studies of small molecule ligands selective to RNA single G bulges

    doi: 10.1093/nar/gkaf559

    Figure Lengend Snippet: Coumarin derivatives can selectively bind to RNA G 1 × 0 bulges: ( A ) RNA structures of the 1 × 0 RNA bulges used for in vitro binding profiling using the FP assay. N = G , A , U , or C (RNA1-4). ( B ) Heatmap profile of the ΔmP = (FP RNA-ligand – FP ligand ) × 1000 for RNA binders in the presence of [RNA] = 5 or 1 μM (red = high polarization, blue = low polarization). ( C ) ΔmP of RNA-ligand complex for RNA ligands at 5 μM. Each data point represents a measurement of a ligand in the 69-compound collection. **** indicates P < .0001. ( D ) Dose-response curves for compounds (SMSM6, C30) selectively binding to the bulged G RNA (RNA1) compared to an 11-nucleotide GA-rich sequence that would form a double loop-like RNA structure measured by the FP assay.

    Article Snippet: 3-Dimensional (3D) structures of three coumarin derivatives (C30, C30-Me, and SMSM64) were prepared using ChemBio Tool.

    Techniques: In Vitro, Binding Assay, FP Assay, Sequencing

    Protonation state of the ligands contributes to the RNA binding. ( A ) Equilibria for the protonation reactions of four coumarin derivatives. ( B ) Protonation energy (relative to C29) was calculated using DFT with B3LYP 6–31G(d) basis set. ( C ) Observed binding affinity of the four compounds.

    Journal: Nucleic Acids Research

    Article Title: Mechanistic studies of small molecule ligands selective to RNA single G bulges

    doi: 10.1093/nar/gkaf559

    Figure Lengend Snippet: Protonation state of the ligands contributes to the RNA binding. ( A ) Equilibria for the protonation reactions of four coumarin derivatives. ( B ) Protonation energy (relative to C29) was calculated using DFT with B3LYP 6–31G(d) basis set. ( C ) Observed binding affinity of the four compounds.

    Article Snippet: 3-Dimensional (3D) structures of three coumarin derivatives (C30, C30-Me, and SMSM64) were prepared using ChemBio Tool.

    Techniques: RNA Binding Assay, Binding Assay

    Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed using BIOVIA Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in PIGT across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.

    Journal: International Journal of Molecular Sciences

    Article Title: A Novel Homozygous Missense Variant of PIGT Related to Multiple Congenital Anomalies-Hypotonia Seizures Syndrome 3 with Elevated of Serum ALP Level in a Thai Newborn Patient

    doi: 10.3390/ijms26062790

    Figure Lengend Snippet: Prediction of protein stability at the alteration site through interaction formation. ( a ) Visualization performed using BIOVIA Discovery Studio Visualizer (Version 21.1.0.20298). ( b ) Conservation of amino acids around position 86 in PIGT across different species. An asterisk ( * ) indicates p.86 of the PIGT protein in each species. ( c , d ) Comparison of intramolecular bonds at the alteration site in wild-type (wt) and mutant (mt) proteins, computed and visualized via DDMut.

    Article Snippet: The three-dimensional structures of both the wild-type and mutant PIGT (PDB: 7wld) were visualized using BIOVIA software [ ].

    Techniques: Comparison, Mutagenesis